[INFO] cloning repository https://github.com/LiberTEM/LiberTEM-dectris-rs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/LiberTEM/LiberTEM-dectris-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FLiberTEM%2FLiberTEM-dectris-rs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FLiberTEM%2FLiberTEM-dectris-rs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 4f4b06a0a5cf8a0add0a37582a55fdd9c9343fa7
[INFO] checking LiberTEM/LiberTEM-dectris-rs against master#9610dfe5a9a731ced1ea4923ecbd0c57fe367898 for beta-170-4
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FLiberTEM%2FLiberTEM-dectris-rs" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/LiberTEM/LiberTEM-dectris-rs on toolchain 9610dfe5a9a731ced1ea4923ecbd0c57fe367898
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9610dfe5a9a731ced1ea4923ecbd0c57fe367898" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] removed /workspace/builds/worker-0-tc1/source/rust-toolchain.toml
[INFO] started tweaking git repo https://github.com/LiberTEM/LiberTEM-dectris-rs
[INFO] finished tweaking git repo https://github.com/LiberTEM/LiberTEM-dectris-rs
[INFO] tweaked toml for git repo https://github.com/LiberTEM/LiberTEM-dectris-rs written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/LiberTEM/LiberTEM-dectris-rs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9610dfe5a9a731ced1ea4923ecbd0c57fe367898" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded zmq-sys v0.11.0
[INFO] [stderr]   Downloaded pyo3-macros v0.17.0
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[INFO] [stderr]   Downloaded zeromq-src v0.1.10+4.3.2
[INFO] [stderr]   Downloaded numpy v0.17.0
[INFO] [stderr]   Downloaded pyo3-macros-backend v0.17.0
[INFO] [stderr]   Downloaded pyo3-build-config v0.17.0
[INFO] [stderr]   Downloaded pyo3-ffi v0.17.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:19e73879b68f455e41552ea35293514db52ea292d993f571636dbffedb77a1ee" "/opt/rustwide/cargo-home/bin/cargo" "+9610dfe5a9a731ced1ea4923ecbd0c57fe367898" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] dcb992c5034d0affc375be531327352b99a7babef6244a0051de6ce41c9d6af6
[INFO] running `Command { std: "docker" "start" "-a" "dcb992c5034d0affc375be531327352b99a7babef6244a0051de6ce41c9d6af6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "dcb992c5034d0affc375be531327352b99a7babef6244a0051de6ce41c9d6af6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "dcb992c5034d0affc375be531327352b99a7babef6244a0051de6ce41c9d6af6", kill_on_drop: false }`
[INFO] [stdout] dcb992c5034d0affc375be531327352b99a7babef6244a0051de6ce41c9d6af6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:19e73879b68f455e41552ea35293514db52ea292d993f571636dbffedb77a1ee" "/opt/rustwide/cargo-home/bin/cargo" "+9610dfe5a9a731ced1ea4923ecbd0c57fe367898" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] df15a88528e5ba30a4363920b901c912975aae4241882484f74be9801365e4c6
[INFO] running `Command { std: "docker" "start" "-a" "df15a88528e5ba30a4363920b901c912975aae4241882484f74be9801365e4c6", kill_on_drop: false }`
[INFO] [stderr]    Compiling unicode-ident v1.0.3
[INFO] [stderr]    Compiling syn v1.0.99
[INFO] [stderr]    Compiling target-lexicon v0.12.4
[INFO] [stderr]    Compiling cc v1.0.73
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]     Checking once_cell v1.13.1
[INFO] [stderr]    Compiling libc v0.2.132
[INFO] [stderr]    Compiling indexmap v1.9.1
[INFO] [stderr]    Compiling proc-macro2 v1.0.43
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]    Compiling crossbeam-utils v0.8.11
[INFO] [stderr]     Checking getrandom v0.2.7
[INFO] [stderr]    Compiling cmake v0.1.48
[INFO] [stderr]    Compiling quote v1.0.21
[INFO] [stderr]    Compiling clang-sys v1.3.3
[INFO] [stderr]    Compiling error-chain v0.10.0
[INFO] [stderr]    Compiling toml v0.2.1
[INFO] [stderr]    Compiling pkg-config v0.3.25
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]    Compiling pyo3-build-config v0.17.0
[INFO] [stderr]    Compiling metadeps v1.1.2
[INFO] [stderr]    Compiling zeromq-src v0.1.10+4.3.2
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling aho-corasick v0.7.18
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[INFO] [stderr]    Compiling serde_derive v1.0.144
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[INFO] [stderr]    Compiling serde_json v1.0.85
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[INFO] [stderr]    Compiling pyo3-macros v0.17.0
[INFO] [stderr]     Checking ndarray v0.15.6
[INFO] [stderr]     Checking crossbeam-deque v0.8.2
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[INFO] [stderr]     Checking crossbeam-channel v0.5.6
[INFO] [stderr]     Checking itoa v1.0.3
[INFO] [stderr]     Checking ryu v1.0.11
[INFO] [stderr]     Checking crossbeam v0.8.2
[INFO] [stderr]     Checking uuid v1.1.2
[INFO] [stderr]     Checking memmap2 v0.5.7
[INFO] [stderr]     Checking spin_sleep v1.1.1
[INFO] [stderr]    Compiling libertem-dectris v0.2.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Checking numpy v0.17.0
[INFO] [stderr] The following warnings were emitted during compilation:
[INFO] [stderr] 
[INFO] [stderr] warning: cc1: fatal error: vendor/bitshuffle/src/bitshuffle.c: No such file or directory
[INFO] [stderr] warning: compilation terminated.
[INFO] [stderr] 
[INFO] [stderr] error: failed to run custom build command for `libertem-dectris v0.2.2 (/opt/rustwide/workdir)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/libertem-dectris-c11c81804033f11e/build-script-build` (exit status: 1)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   cargo:rerun-if-changed=vendor/wrapper.h
[INFO] [stderr]   TARGET = Some("x86_64-unknown-linux-gnu")
[INFO] [stderr]   OPT_LEVEL = Some("0")
[INFO] [stderr]   HOST = Some("x86_64-unknown-linux-gnu")
[INFO] [stderr]   CC_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CC_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CC = None
[INFO] [stderr]   CC = None
[INFO] [stderr]   CFLAGS_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CFLAGS_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CFLAGS = None
[INFO] [stderr]   CFLAGS = None
[INFO] [stderr]   CRATE_CC_NO_DEFAULTS = None
[INFO] [stderr]   DEBUG = Some("true")
[INFO] [stderr]   CARGO_CFG_TARGET_FEATURE = Some("fxsr,sse,sse2")
[INFO] [stderr]   CC_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CC_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CC = None
[INFO] [stderr]   CC = None
[INFO] [stderr]   CFLAGS_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CFLAGS_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CFLAGS = None
[INFO] [stderr]   CFLAGS = None
[INFO] [stderr]   CRATE_CC_NO_DEFAULTS = None
[INFO] [stderr]   CARGO_CFG_TARGET_FEATURE = Some("fxsr,sse,sse2")
[INFO] [stderr]   CC_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CC_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CC = None
[INFO] [stderr]   CC = None
[INFO] [stderr]   CFLAGS_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CFLAGS_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CFLAGS = None
[INFO] [stderr]   CFLAGS = None
[INFO] [stderr]   CRATE_CC_NO_DEFAULTS = None
[INFO] [stderr]   CARGO_CFG_TARGET_FEATURE = Some("fxsr,sse,sse2")
[INFO] [stderr]   CC_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CC_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CC = None
[INFO] [stderr]   CC = None
[INFO] [stderr]   CFLAGS_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CFLAGS_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CFLAGS = None
[INFO] [stderr]   CFLAGS = None
[INFO] [stderr]   CRATE_CC_NO_DEFAULTS = None
[INFO] [stderr]   CARGO_CFG_TARGET_FEATURE = Some("fxsr,sse,sse2")
[INFO] [stderr]   CC_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CC_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CC = None
[INFO] [stderr]   CC = None
[INFO] [stderr]   CFLAGS_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CFLAGS_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CFLAGS = None
[INFO] [stderr]   CFLAGS = None
[INFO] [stderr]   CRATE_CC_NO_DEFAULTS = None
[INFO] [stderr]   CARGO_CFG_TARGET_FEATURE = Some("fxsr,sse,sse2")
[INFO] [stderr]   CC_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CC_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CC = None
[INFO] [stderr]   CC = None
[INFO] [stderr]   CFLAGS_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CFLAGS_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CFLAGS = None
[INFO] [stderr]   CFLAGS = None
[INFO] [stderr]   CRATE_CC_NO_DEFAULTS = None
[INFO] [stderr]   CARGO_CFG_TARGET_FEATURE = Some("fxsr,sse,sse2")
[INFO] [stderr]   CC_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CC_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CC = None
[INFO] [stderr]   CC = None
[INFO] [stderr]   CFLAGS_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CFLAGS_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CFLAGS = None
[INFO] [stderr]   CFLAGS = None
[INFO] [stderr]   CRATE_CC_NO_DEFAULTS = None
[INFO] [stderr]   CARGO_CFG_TARGET_FEATURE = Some("fxsr,sse,sse2")
[INFO] [stderr]   CC_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CC_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CC = None
[INFO] [stderr]   CC = None
[INFO] [stderr]   CFLAGS_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CFLAGS_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CFLAGS = None
[INFO] [stderr]   CFLAGS = None
[INFO] [stderr]   CRATE_CC_NO_DEFAULTS = None
[INFO] [stderr]   CARGO_CFG_TARGET_FEATURE = Some("fxsr,sse,sse2")
[INFO] [stderr]   CC_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CC_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CC = None
[INFO] [stderr]   CC = None
[INFO] [stderr]   CFLAGS_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CFLAGS_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CFLAGS = None
[INFO] [stderr]   CFLAGS = None
[INFO] [stderr]   CRATE_CC_NO_DEFAULTS = None
[INFO] [stderr]   CARGO_CFG_TARGET_FEATURE = Some("fxsr,sse,sse2")
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "vendor/bitshuffle/lz4" "-I" "vendor/bitshuffle" "-Wall" "-Wextra" "-O3" "-ffast-math" "-std=c99" "-fno-strict-aliasing" "-fPIC" "-w" "-DBSHUF_VERSION_MAJOR=0" "-DBSHUF_VERSION_MINOR=4" "-DBSHUF_VERSION_POINT=2" "-o" "/opt/rustwide/target/debug/build/libertem-dectris-434de2c90e0b18ec/out/vendor/bitshuffle/src/bitshuffle.o" "-c" "vendor/bitshuffle/src/bitshuffle.c"
[INFO] [stderr]   cargo:warning=cc1: fatal error: vendor/bitshuffle/src/bitshuffle.c: No such file or directory
[INFO] [stderr]   cargo:warning=compilation terminated.
[INFO] [stderr]   exit status: 1
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   error occurred: Command "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "vendor/bitshuffle/lz4" "-I" "vendor/bitshuffle" "-Wall" "-Wextra" "-O3" "-ffast-math" "-std=c99" "-fno-strict-aliasing" "-fPIC" "-w" "-DBSHUF_VERSION_MAJOR=0" "-DBSHUF_VERSION_MINOR=4" "-DBSHUF_VERSION_POINT=2" "-o" "/opt/rustwide/target/debug/build/libertem-dectris-434de2c90e0b18ec/out/vendor/bitshuffle/src/bitshuffle.o" "-c" "vendor/bitshuffle/src/bitshuffle.c" with args "cc" did not execute successfully (status code exit status: 1).
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "df15a88528e5ba30a4363920b901c912975aae4241882484f74be9801365e4c6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "df15a88528e5ba30a4363920b901c912975aae4241882484f74be9801365e4c6", kill_on_drop: false }`
[INFO] [stdout] df15a88528e5ba30a4363920b901c912975aae4241882484f74be9801365e4c6
